EventsMOL2NET'21, Conference on Molecular, Biomed., Comput. & Network Science and Engineering, 7th ed.
Published
This submission belongs to the session 01. CHEMBIO.INFO-07: Cheminfo., Chemom., Comput. Chem. & Bioinfo. Congress München, GR-Cambridge, UK-Ch. Hill, USA, 2021. of the event MOL2NET'21, Conference on Molecular, Biomed., Comput. & Network Science and Engineering, 7th ed.
Published date
05 Nov, 2021
Academic Editor
author-avatarHumbert G. Díaz
Citation
Nhung Phuong NGUYEN, Nghia Dinh TRAN, Quang Dinh LE, Oanh Kieu Thi NGUYEN, Hai The PHAM, Multi-objective screening of non-small cell lung cancer drug candidates, in Proceedings of MOL2NET'21, Conference on Molecular, Biomed., Comput. & Network Science and Engineering, 7th ed., 25 January–30 December 2021, MDPI: Basel, Switzerland, doi: 10.3390/mol2net-07-11597
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Multi-objective screening of non-small cell lung cancer drug candidates

Nghia Dinh TRAN 1
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1. General and Inorganic Department, Hanoi University of Pharmacy, 13 – 15 Le Thanh Tong Street, Hoan Kiem District, Hanoi, Vietnam
2. Department of Life Science, University of Science and Technology of Hanoi, 18 Hoang Quoc Viet Road, Cau Giay District, Hanoi, Vietnam
3. Medicinal Chemistry Department, , Hanoi University of Pharmacy, 13 – 15 Le Thanh Tong Street, Hoan Kiem District, Hanoi, Vietnam
Abstract

Despite improvements in diagnosis and chemotherapy, non-small cell lung cancer (NSCLC) remains one of the most common cancer and has the largest proportion of all cancer death rates today. Computational approaches have been widely applied for early detection of novel treatment for NSCLC. Herein we developed a multi-objective approach or the screening of chemical compounds simultaneously active against three NSCLC cell lines: A549, NCI-H1299 and NCI-H1975. The first step consisted of developing ensemble models based on cytotoxicity data against three NSCLC cell lines curated from ChEMBL database. A desirable-based algorithm was then applied to incorporate these models into a multi-objective optimization system that can be used for virtual screening protocol. This system showed suitable screening performance with the Boltzmann-Enhanced Discrimination of ROC BEDROC = 0.62, the Enrichment Factor (EF)1% = 30 and the Area Under the Accumulation Curve (AUAC) = 0.69

Keywords
Lung cancer
QSAR
multi-objective
virtual screening
model ensembling
desirability
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