This submission belongs to the session g. Computational Chemistry of the event The 11th International Electronic Conference on Synthetic Organic Chemistry
Published date
30 Nov, 2007
Citation
Marta Teijeira, Liane Saíz-Urra, Alexander Durán-Martínez, Maykel Pérez González, Miguel Ángel Cabrera-Pérez, Daimel Castillo-González, Telomerase inhibitory activity by stabilization of G-quartet: A QSAR approach using 2D autocorrelation descriptors, in Proceedings of The 11th International Electronic Conference on Synthetic Organic Chemistry, 1 November–30 November 2007, MDPI: Basel, Switzerland, doi: 10.3390/ecsoc-11-01360
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Telomerase inhibitory activity by stabilization of G-quartet: A QSAR approach using 2D autocorrelation descriptors
Daimel Castillo-González 1,2
Miguel Ángel Cabrera-Pérez 2
Maykel Pérez González 2
Alexander Durán-Martínez 1
Liane Saíz-Urra 2
Marta Teijeira 3
1. Department of Chemistry. Central University of Las Villas. Santa Clara 54830, Villa Clara, Cuba
2. Molecular Simulation & Drug Design Group, Centre of Chemical Bioactive, Central University of Las Villas, Santa Clara 54830, Villa Clara, Cuba
3. Department of Organic Chemistry, Vigo University, C.P. 36200 Vigo, Spain
Abstract
A QSAR approach on a dataset of 546 inhibitors of telomerase activity, by interaction with G-quadruplex DNA, was carried out using 2D autocorrelation descriptors. A linear discriminant analysis (LDA) was made on a training set of 437 compounds and it was assessed with 109 compounds belongs to the test set. The model good classified the 80.09% of the dataset and the percentage of good prediction was 78.89%. Only 5 compounds were not classified. The 2D autocorrelation descriptors are able to explain the factors that stabilize the G-quadruplex structure and consequently the inhibition of telomerase by this biological mechanism.
Keywords
Telomerase inhibitors
G-quadruplex
molecular descriptors
QSAR
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