EventsThe 28th International Electronic Conference on Synthetic Organic Chemistry
Published
This submission belongs to the session S5. Computational Chemistry of the event The 28th International Electronic Conference on Synthetic Organic Chemistry
Published date
13 Dec, 2024
Academic Editor
author-avatarJulio A. Seijas
Citation
Lissette Haro, Christian David Alcivar, Theoretical study of intermolecular interactions in benzopyrans substituted with polyhaloalkyl groups, in Proceedings of The 28th International Electronic Conference on Synthetic Organic Chemistry, 15 November–30 November 2024, MDPI: Basel, Switzerland, doi: 10.3390/ecsoc-28-20209
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Theoretical study of intermolecular interactions in benzopyrans substituted with polyhaloalkyl groups

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1. Facultad de Ciencias Quimicas, Universidad Central del Ecuador, Francisco Viteri s/n y Gilberto Gato Sobral, Quito 170521, Ecuador, Ecuador
Abstract

Halogen bonds have been found to occur in organic, inorganic, and biological systems, these bonds can be defined as a short C-X---O-Y interaction, where the X---O distance is less than or equal to the sums of the respective van der Waals radius, and have recently attracted much attention in medical chemistry, chemical biology and supramolecular chemistry. A study of the solid-state intermolecular interactions of twenty-nine benzopyrans substituted with polyhaloalkyl groups was carried out by quantum chemical calculations using the Mercury and WinGX computer programs. Molecular structures were obtained from crystallographic information files (CIF) of the CCDC database. C-H---O, C-H---X, C-X---O and C-X---X type contacts, characterized as unconventional hydrogen bonds, were identified and calculated. The criteria used for distances and angles were d(D---A) < R(D) + R(A) + 0.50 and d(H---A) < R(H) + R(A) - 0.12°, D-H---A > 100.0°, where D is the donor atom, A is the acceptor atom, R is the Van der Waals radius and d is the interatomic distance. In addition, Etter's notation was used to describe sets of hydrogen bonds in organic crystals, detailing the intermolecular contacts and periodic arrangements of the crystal packing. It was corroborated that certain positions of halogen atoms and their interactions play an important role in stabilizing the crystal lattice.

Keywords
crystal structure
intermolecular interaction
hydrogen bonding
computational chemistry
halogen bonds
chromones
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