EventsThe 28th International Electronic Conference on Synthetic Organic Chemistry
Published
with-doi10.3390/ecsoc-28-20256 (registering DOI)
This submission belongs to the session S1. General Organic Synthesis of the event The 28th International Electronic Conference on Synthetic Organic Chemistry
Published date
15 Nov, 2024
Academic Editor
author-avatarJulio A. Seijas
Citation
Juan Carlos Jiménez-Cruz, Ramón Guzmán-Mejía, Pedro Navaro-Santos, Hugo A. García-Gutiérrez, Julio Cesar Ontiveros-Rodríguez, Rafael Herrera-Bucio, Judit A. Aviña-Verduzco, SYNTHESIS OF PEPTIDE-NSAID HYBRID COMPOUNDS AND THEIR SELECTIVITY IN INHIBITING THE DUAL COX-LOX SYSTEM DESCRIBED THROUGH DOCKING AND MOLECULAR DYNAMICS, in Proceedings of The 28th International Electronic Conference on Synthetic Organic Chemistry, 15 November–30 November 2024, MDPI: Basel, Switzerland, doi: 10.3390/ecsoc-28-20256
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SYNTHESIS OF PEPTIDE-NSAID HYBRID COMPOUNDS AND THEIR SELECTIVITY IN INHIBITING THE DUAL COX-LOX SYSTEM DESCRIBED THROUGH DOCKING AND MOLECULAR DYNAMICS

1. CONACYT-Universidad Michoacana de San Nicolás de Hidalgo, Edificio B-1, Ciudad Universitaria, Morelia, Michoacán, 58030, México, Mexico
2. Francisco J. Múgica, Instituto de Investigaciones Químico Biologicas, Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Michoacán, 58030, México, Mexico
Abstract

Emerging diseases such as COVID-19 and those of significant public health concern, like rheumatoid arthritis (RA), asthma, Alzheimer’s and parkinson’s diseases, cause hyperinflammation inducing the expression and activation of the isoenzyme cyclooxygenase 2 (COX-2). COX-2 and 5-lipoxygenase both produce thromboxanes and leukotrienes that induce cytokine expression such as tumor necrosis factor alpha (TNF-α) and interlucins (IL-1ß, IL-6). Therefore, one strategy to combat exacerbated inflammation is to develop molecules that inhibit the COX-2/5-LOX system by coupling NSAID structures with amino acids, peptides, or peptidomimetic compounds. The current research reports the synthesis of hybrid compounds involving 4-(4-methoxyphenyl)-4-oxobutanoic acid, an analog of the NSAID fenbufen obtained through Heck coupling, with the aromatic dipeptides Tyr-Tyr, Phe-Tyr, Tyr-Phe y Phe-Phe. Furthermore, molecular docking studies of the obtained compounds showed binding energies of approximately -11.01 kcal/mol (NSAID-Tyr-Phe), comparable to the reference drug celecoxib and superior to diclofenac. Similarly, the compound NSAID-Phe-Tyr demonstrated a binding energy of -9.2 kcal/mol, which was superior to the reference drug Zileuton. The most successful results revealed stability in the molecular dynamics trajectories executed in NAMD and excellent binding free energies (-33.91 kcal/mol) calculated using gmx_MMPBSA, which enabled a detailed analysis of the energy contribution of each amino acid in the catalytic site.

Keywords
Inflammation
NSAIDs
Peptide
Molecular Dynamic
Palladium
COX/LOX
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