EventsMOL2NET'18, Conference on Molecular, Biomed., Comput. & Network Science and Engineering, 4th ed.
Published
This submission belongs to the session 03. CHEMBIOINFO-04: Chem-Bioinformatics Congress Cambridge, UK-Chapel Hill and Duluth, USA, 2018 of the event MOL2NET'18, Conference on Molecular, Biomed., Comput. & Network Science and Engineering, 4th ed.
Published date
05 Jan, 2019
Citation
Lobna DAOUD, Adel HADJ BRAHIM, Houda HMANI, Mouna JLIDI, Manel BEN ALI, Samir BEJAR, Naser ALIYE FETO, Mamdouh BEN ALI, First draft genome sequencing of the Salicola genus, in Proceedings of MOL2NET'18, Conference on Molecular, Biomed., Comput. & Network Science and Engineering, 4th ed., 15 January 2018–20 January 2019, MDPI: Basel, Switzerland, doi: 10.3390/mol2net-04-06117
Share
Email
Facebook
Twitter
LinkedIn

First draft genome sequencing of the Salicola genus

image
Naser ALIYE FETO 3
1. Center of Biotechnology of Sfax
2. Astrum Biotech at Center of Biotechnology of Sfax
3. OMICS Research Group & Facility, South Africa
4. Center of Biotechnology of Sfax and Astrum Biotech
Abstract

Salicola sp. strain SBJ9 is an extremely halophilic bacterium newly isolated from a hypersaline lake in Sfax (Tunisia). It is an aerobic Gram negative bacterium, bacilli shaped and motile. The strain SBJ9 grows optimally at 150 g/l (2.57 M) NaCl, 35 °C and pH 7 and it is able to hydrolyze proteins and lipids at high salinities. Actually, Salicola genus contains only two species (S. marasensis and S. salis). This research reported the first draft genome of a bacterium belonging to Salicola and the different obtained and annotated sequences and genes. Salicola sp. strain SBJ9 genomic sequence contains 4.643.441 bp with a G+C content of 60.52%. The annotation monitored by the RAST server reveals 65 RNA sequences and 3995 coding genes including 255 and 182 sub-systems of protein metabolism and lipids, respectively. The further analysis of SBJ9 genomic sequence will clarify the ideas regarding the adaptation of the Salicola strains and their proteins to the extremely high salt concentrations and will permit the development of new bio-catalyzers for industrial applications.

Keywords
Salicola
extremely halophilic
draft genome
annotation
Manuscript
Poster
Mol2Net paper 2.pdf
Purification and biochemical characterization of a novel detergent-stable serine alkaline protease from Bacillus safensis strain RH12
Can Fusion Transcripts between a transposable element and an exon generate piRNAs in mouse (Mus musculus)?