EventsMOL2NET'20, Conference on Molecular, Biomed., Comput. & Network Science and Engineering, 6th ed.
Published
with-doi10.3390/mol2net-06-09110 (registering DOI)
This submission belongs to the session 03. CHEMBIOINFO-06: Chem-Bioinformatics Congress, München, Germany-Chapel Hill, USA, 2020. of the event MOL2NET'20, Conference on Molecular, Biomed., Comput. & Network Science and Engineering, 6th ed.
Published date
12 Jan, 2021
Citation
Karel Diéguez-Santana, Amilkar Y. Puris Caceres, Gerardo M. Casañola-Martin, Oscar M Rivera-Borroto, In silico toxicity prediction of phenol derivatives with ISIDA descriptors using multiple linear regression and machine learning approach, in Proceedings of MOL2NET'20, Conference on Molecular, Biomed., Comput. & Network Science and Engineering, 6th ed., 30 January 2020–30 January 2021, MDPI: Basel, Switzerland, doi: 10.3390/mol2net-06-09110
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In silico toxicity prediction of phenol derivatives with ISIDA descriptors using multiple linear regression and machine learning approach

Amilkar Y. Puris Caceres 2
Oscar M Rivera-Borroto 3,4,5
1. Universidad Regional Amazónica Ikiam, Parroquia Muyuna km 7 vía Alto Tena, 150150, Tena-Napo, Ecuador
2. Facultad de Ciencias de La Ingeniería, Universidad Técnica Estatal de Quevedo, Ecuador
3. Departamento de Química Física Aplicada, Facultad de Ciencias, Universidad Autónoma de Madrid, 28049 Madrid, España
4. Department of Dev. Mathematics, Houston Community College-West Loop Campus, Houston TX, 77081, USA.
5. Department of Mathematics, Lone Star College-CyFair Campus, Houston, TX, 77433, USA
6. Department of Systems and Computer Engineering, Carleton University, Ottawa, ON, Canada
7. Department of Coatings and Polymeric Materials, North Dakota State University, Fargo, ND, 58102, USA.
Abstract

Phenolic compounds are considered as dangerous pollutants, which produces serious environmental problems by pollution of water streams because of their great water solubility and high toxicity. In this paper we present the modeling of inhibitory grown activity against Tetrahymena pyriformis with structural feature descriptors. Quantitative structure-toxicity relationship model for acute toxicity of phenol derivatives was performed using Multiple Linear Regression (MLR), Reduced Error Pruning Tree (REPTree), M5 Model Rules (M5R), Multilayer Perceptron (MLP), Instance-Based Learning algorithms using K nearest neighbor (IBk-ANN), Support vector machine (SVM), and Radial basis function network (RBF). The correlation coefficients (R2) of training sets and test sets were 0.88 and 0.86 for the best MLR model, 0.82 and 0.72 for the best machine learning model (SVM), respectively. Following to the obtained results, our proposed model may be useful to predict of toxicity and risk assessment of phenol derivatives compound.

Keywords
Phenolic compounds
acute toxicity
Tetrahymena pyriformis
structural feature descriptors
Support vector machine
Manuscript
Poster
mol2net-06_MOL2NET-2020-template (P1).pdf
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