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Predicting Antimalarial Activity Using Atomic Weight Vectors and Machine Learning
* 1 , 2, 3 , 4 , 5 , 6, 7 , 8 , 9 , 10
1  Department of Computer Sciences, Faculty of Informatics, Camagüey University, Camagüey City, 74650, Cuba
2  Unidad de Toxicología Experimental, Universidad de Ciencias Médicas de Villa Clara
3  Universidad Tecnológica Metropolitana (UTEM), Santiago 8940577, Chile
4  Department of Coatings and Polymeric Materials, North Dakota State University, Fargo, ND 58102, USA
5  Departamento de Química Física Aplicada, Facultad de Ciencias, Universidad Autónoma de Madrid (UAM), 28049 Madrid, Spain
6  Alfa Vitamins Laboratories, Miami, Florida, 33166, USA
7  Laboratorio de Bioinformática y Química Computacional, Universidad Católica del Maule, Talca, Chile
8  Department of Computer Sciences, Faculty of Informatics, Camagüey University
9  Unidad de Transferencia Tecnológica, Centro de Investigación Científica y de Educación Superior de Ensenada
10  Centro Regional Universitario de Colón. Universidad de Panamá
Academic Editor: mol2net team

Abstract:

Background: Malaria is a disease caused by the Plasmodium parasite, which is transmitted through the bites of infected mosquitos. Only the Anopheles genus of mosquito can transmit malaria. The symptoms of this disease can include fever, vomiting, and headache. As millions of people are exposed to the threat of the Plasmodium parasite, it leads to millions of deaths annually. Therefore, there is a need to develop models for predicting compounds that can counteract this disease.
Objective: The primary objective of this research was to employ different techniques of machine learning on molecular descriptors obtained from Atomic Weight Vectors (AWV) and MD-LOVIs tool to predict the activity of potential antimalarial compounds.
Methods: Several machine learning techniques such as Ranger-ES-AWV (accuracy = 0.7714), Random Forest-ES-AWV (accuracy = 0.7718), SVMPoly-IB-AWV (accuracy = 0.787), C5.0-IB-AWV (accuracy = 0.7746), Ranger-IB-AWV (accuracy = 0.7854), GBM-IB-AWV (accuracy = 0.7882), and Treebag-IB-AWV (accuracy = 0.7798) were applied to predict the activity of antimalarial compounds.
Results: The results showed that the models obtained using machine learning techniques can be a powerful tool for predicting the activity of antimalarial compounds.
Conclusion: This study demonstrates the potential of machine learning techniques for predicting the activity of antimalarial compounds. These models can be used to identify new compounds with antimalarial properties and contribute to reducing the number of malaria-related deaths worldwide.

Keywords: antimalarial activity; machine learning; atomic weighted vector; MD-LOVIs
Comments on this paper
estefania Ascencio
Interesting research, I would like to ask you some questions


1.What is the role of virtual screening in the early stages of drug discovery, and how does it utilize computational techniques?

2. Could you elaborate on the significance of molecular docking in virtual screening and its application in simulating binding interactions?



 
 
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