Introduction
Recently, we have synthesized 2-(ethoxymethylene)malononitrile 1 to reveal its crystal structure. This simply built compound is a very convenient building block for the construction of various heterocycles and it is assuming as an intermediate in different three-component reactions. In this study, we present the results of XRD of the titled compound demonstrating in crystal the linkage of the co-oriented molecules via N-H···N≡C non-covalent interactions. To evaluate the energy of such interactions, we conducted DFT simulations.
Experimental
The 1H and 13C NMR spectra were recorded with a Varian (Agilent) 400 spectrometer. An XRD study of 1 was performed an Xcalibur Ruby diffractometer. Compound 1 was obtained by the known procedure. Coordinates from Xray data were used as initial and full geometry optimization of monomers and dimers were performed using DFT with different functionals and the 6-311++G(d,p) basis set.
Results and Discussion
The molecules of 1 are linked into infinite chains via N-H···N≡C close contacts with distance of 2.494(3) Å. When theoretical measuring the energy of H···N non-covalent interactions by DFT, it was determined by M06-2X functional equal to -1.20 kcal/mol meaning weak attraction.
Acknowledgments
This work was supported by the Russian Science Foundation (grant no. 22-23-00171 to VSG).
Did you used counterpoise method?
thanks
We used calculations in vacuum.
No counterpoise method was used.
Thank you