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Quantum chemical modeling of molecular crystal deformations
* 1 , 2 , 3
1  Laboratoire de Spectroscopie pour les Interactions, la Réactivité et L’environnement (UMR CNRS A8516), Université de Lille, 59655, Villeneuve d'Ascq Cedex, France; V.N. Karazin Kharkiv National University, 4 Svobody Sq., Kharkiv, 61022, Ukraine
2  Laboratoire de Spectroscopie pour les Interactions, la Réactivité et L’environnement (UMR CNRS A8516), Université de Lille, 59655, Villeneuve d'Ascq Cedex, France
3  V.N. Karazin Kharkiv National University, 4 Svobody Sq., Kharkiv, 61022, Ukraine; SSI “Institute for Single Crystals” NAS of Ukraine, 60 Nauky ave., Kharkiv, 61001, Ukraine

Abstract:

Polymorphism is the phenomenon of the existence of different arrangements of molecules in the crystal phase. Molecules can differ in conformations (conformational polymorphism) and / or in intermolecular interactions between them in the crystal (orientational polymorphism). The influence of molecular packing on the properties of materials cannot be overestimated, thus, the choice of the most suitable polymorphic form is crucial for manufacture. However, a lot of crystal structures are not stable and can undergo polymorphic transformation due to different reasons.

We present a multistage method for the analysis of mechanisms of polymorphic transformations based on shear slips of strongly bound fragments in structures that differ mainly in packing on the example of pharmaceutical compounds aspirin, piracetam and ibuprofen. The first stage consists in the computation of pairwise interaction energies between molecules in a crystal using quantum chemical methods. It reveals the most strongly bound structural fragments (building units and basic structural motifs) and the planes between which the binding of structural fragments is the least. In the second stage, parts of two adjacent structural motifs are displaced in different directions within the planes separated out earlier. The most probable shift directions are chosen based on a geometric estimate of minimum distances during translations and, further, shift energy profiles and barriers inherent to them are calculated. Inexpensive and efficient, our method allows to determine probabilities of molecular translations with high accuracy.

Keywords: Drugs polymorpism;Polymorpic transformations;Quantum chemical calculation
Comments on this paper
Changquan Calvin Sun
Application of this method in identifying slip system?
The approach of first identifying strongly bound units and then calculating energy profiles for them to undergo relative displacement is a good approach. It appears this approach can be used to identify the slip systems in organic crystals.
Yevhenii Vaksler
Dear Prof. Sun,

Thank You for Your comment.
The application we show in this presentation matches exactly to the idea proposed by You. We applied this set of methods to the aspirin, piracetam and ibuprofen for several purposes, one of which is to identify correctly the slip directions in molecular (pharmaceutical) crystals and to assess the probability of such movements as a responce to external influences.

Changquan Calvin Sun
Dissemination of this method
Dear Yevhenii,

That sounds good. Have you develop codes for doing this automatically? I see promise in this technique. However, its broad adoption depends on how easy others can use it.

Take care,
Yevhenii Vaksler
Dear Prof. Sun,

Thank You for Your comment.
Currently we are working on a standalone software, which will generate and treat the energy vector diagrams and shift barriers based on topological and quantum-chemical calculations. We are going to publish it as a freeware in one of the following publications.

All the best,
Yevhenii Vaksler

Changquan Calvin Sun
Dear Yevhenii,
That is excellent. It will be certainly a useful tool for studying mechanical properties of molecular crystals.



 
 
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